BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E06LP1|AL430398
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1359 0.0
3x_Contig1257 430 e-120
>3x_Contig919
Length = 4576
Score = 1359 bits (685), Expect = 0.0
Identities = 714/723 (98%), Gaps = 2/723 (0%)
Strand = Plus / Plus
Query: 1 ccaaagaaataacgttcatcttcaagttggccatccattcctcatcgtcttgaatcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3845 ccaaagaaataacgttcatcttcaagttggccatccattcctcatcgtcttgaatcttaa 3904
Query: 61 cgaa-ttcattgctaactggtcagactttactgcgtttttgatttcagcatatctctgtw 119
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3905 cgaagttcattgctaactggtcagactttactgcgtttttgatttcagcatatctctgta 3964
Query: 120 ataaattattgtagaaatctaggcatgattcttttgtgaagaaacttaaaagatatgact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3965 ataaattattgtagaaatctaggcatgattcttttgtgaagaaacttaaaagatatgact 4024
Query: 180 gttgtgaacaacttgacggagaaatggcaatctgtttggttaaagcaggggctgattcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 gttgtgaacaacttgacggagaaatggcaatctgtttggttaaagcaggggctgattcct 4084
Query: 240 tatccttatcatcctctctcttgctattgttattattatcagcattataattttgattag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4085 tatccttatcatcctctctcttgctattgttattattatcagcattataattttgattag 4144
Query: 300 gatcatcatcattattactagtattaaggttttcaatgtcatcgccggtgtcctcatctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4145 gatcatcatcattattactagtattaaggttttcaatgtcatcgccggtgtcctcatctt 4204
Query: 360 tgatcaagtaaatgctttctattgggtaattttttgcaactttttgtaagaactcgacaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4205 tgatcaagtaaatgctttctattgggtaattttttgcaactttttgtaagaactcgacaa 4264
Query: 420 tatctagctcagaattaacatttgtaaaaagcaacgatctgcttctataagtatcattcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4265 tatctagctcagaattaacatttgtaaaaagcaacgatctgcttctataagtatcattcc 4324
Query: 480 ccttaggtagaatgctatattggaattggattttcaattcagaatcgatagtctttcgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4325 ccttaggtagaatgctatattggaattggattttcaattcagaatcgatagtctttcgta 4384
Query: 540 ttgatttgggacccgagctgccagacatggaacctgatgtggaagctgaaaaagattgag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4385 ttgatttgggacccgagctgccagacatggaacctgatgtggaagctgaaaaagattgag 4444
Query: 600 atctagatgcagatctagagctgtaacctctttcaacatcatattctgcttccactttgt 659
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 4445 atctagatgcagatctagagctgntacctctttc-acatcatattctgcttccactttgt 4503
Query: 660 tattgtcacgagaatgttctcgttgttgctggggtttgttatcttttcgtcttgctcttc 719
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 4504 tattgtcacgagaatgttctcgttgttgctggnngttgntatcttttcgtcttgctcttc 4563
Query: 720 tca 722
|||
Sbjct: 4564 tca 4566
>3x_Contig1257
Length = 4889
Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Minus
Query: 697 gttatcttttcgtcttgctcttctcaatctaccagatggtgctggcctcaatttcggtgc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 gttatcttttcgtcttgctcttctcaatctaccagatggtgctggcctcaatttcggtgc 4830
Query: 757 cggtgggtagaatgatttatagcttgaattacgcaaattcattatgttattagatcctac 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4829 cggtgggtagaatgatttatagcttgaattacgcaaattcattatgttattagatcctac 4770
Query: 817 tgggacaccattcgctccagtaccagcagacataggtccaccagtttgtggagtgtttac 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4769 tgggacaccattcgctccagtaccagcagacataggtccaccagtttgtggagtgtttac 4710
Query: 877 aaacggcgatccaactaacagatgactcggcaacagt 913
|||||||||||||||||||||||||||||||||||||
Sbjct: 4709 aaacggcgatccaactaacagatgactcggcaacagt 4673
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7842
Number of Sequences: 1807
Number of extensions: 7842
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 2
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)